---
schema: "interfacedelta-service-md/1"
target_key: "sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42"
origin: "https://seqbench.com"
protocols: ["mcp"]
observed_at: "2026-11-13T10:40:11.867Z"
generated_at: "2026-11-13T11:52:46.368Z"
record_url: "https://interfacedelta.com/atlas/sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42"
record_api: "https://interfacedelta.com/api/v1/record/services/sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42"
source: "InterfaceDelta atlas"
license_note: "Use of this record is governed by https://interfacedelta.com/terms."
---

# Service record: https://seqbench.com

## Identity
- Origin: https://seqbench.com
- Endpoints: https://seqbench.com/api/mcp
- Protocols: mcp
- Registry names: com.seqbench/workbench
- First retained observation: 2026-11-13T10:40:11.867Z
- Latest observation: 2026-11-13T10:40:11.867Z

## Tools
- Tool 1: alphafold\_lookup (mcp); inputs: accession; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 2: annealing\_temperature (mcp); inputs: ampliconBp, forwardPrimer, highComplexityTemplate, polymerase, reversePrimer; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 3: aso\_design (mcp); inputs: length, target, wing; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 4: assembly\_outcomes (mcp); inputs: circular, dataset, enzyme, fragments, maxAlternatives, method, names, overlapLen; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 5: band\_traceback (mcp); inputs: circular, forwardPrimer, maxCandidates, maxMismatches, observedSize, reversePrimer, template, toleranceBp; inputs omitted: 1; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 6: barcode\_audit (mcp); inputs: barcodes, metric; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 7: barcode\_design (mcp); inputs: count, exclude, existing, gcMax, gcMin, length, maxHomopolymer, metric; inputs omitted: 2; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 8: base\_edit\_quant (mcp); inputs: controlBases, controlChannels, editedBases, editedChannels, editor, from, offset, protospacer; inputs omitted: 6; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 9: base\_editing\_design (mcp); inputs: editor, frameStart, target, targetPosition; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 10: batch (mcp); inputs: args, input, tool; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 11: blast\_poll (mcp); inputs: rid; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 12: blast\_submit (mcp); inputs: database, evalue, hitlistSize, megablast, program, sequence, typeMaterial; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 13: centrifuge\_conversion (mcp); inputs: radiusCm, rcf, rpm; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 14: characterize\_sequence (mcp); inputs: circular, endPrimerLength, maxOrfs, minOrfAa, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 15: cloning\_diagnose (mcp); inputs: agarosePercent, annealingTempC, colonies, enzymes, gelBandsObservedBp, hostMethylation, insertSource, ladderRan; inputs omitted: 19; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 16: cloning\_next\_observation (mcp); inputs: agarosePercent, annealingTempC, colonies, enzymes, gelBandsObservedBp, hostMethylation, insertSource, ladderRan; inputs omitted: 19; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 17: cloning\_simulate (mcp); inputs: armLength, armTmTarget, chewBackLen, circular, deleteTo, dephosphorylateVector, enzyme, enzyme3; inputs omitted: 17; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 18: codon\_adaptation\_index (mcp); inputs: frameStart, minRareRun, organism, rareThreshold, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 19: codon\_optimize (mcp); inputs: inputType, organism, protein; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 20: construct\_autofix (mcp); inputs: avoidEnzymes, crypticOrfMinAa, frameStart, gcHigh, gcLow, gcWindow, homopolymerMin, maxPasses; inputs omitted: 2; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 21: construct\_qc (mcp); inputs: avoidEnzymes, crypticOrfMinAa, frameStart, gcHigh, gcLow, gcWindow, homopolymerMin, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 22: cpg\_islands (mcp); inputs: mergeGap, minGcPct, minLength, minObsExp, preset, sequence, windowSize; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 23: crispr\_grna\_design (mcp); inputs: minScore, nuclease, searchReverseStrand, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 24: crispr\_hdr\_donor (mcp); inputs: armLength, blockPam, designGenotypingPrimers, editEnd, editStart, frameStart, guideEnd, guideStart; inputs omitted: 4; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 25: crispr\_offtarget\_check (mcp); inputs: maxMismatches, nuclease, protospacer; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 26: crispr\_ontarget (mcp); inputs: contexts, searchReverseStrand, sequence, tracr; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 27: cross\_dimer (mcp); inputs: sequenceA, sequenceB; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 28: diagnostic\_digest (mcp); inputs: agarosePercent, alternatives, circular, enzymes, includePairs, intended, maxSuggestions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 29: dna\_molarity (mcp); inputs: length, massNg, sequence, targetConcentration, targetUnit, targetVolumeUl, type, volumeUl; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 30: dot\_plot (mcp); inputs: a, b, bothStrands, maxRuns, minRunLength, wordSize; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 31: double\_digest (mcp); inputs: enzymeA, enzymeB; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 32: editing\_plate\_quantify (mcp); inputs: altAllele, controlBases, controlChannels, cutPosition, deletedLength, editKind, editPosition, editor; inputs omitted: 15; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 33: elsa\_capacity (mcp); inputs: lmax; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 34: elsa\_design (mcp); inputs: guides, includeGenbank, insulate, lmax, name; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 35: export\_echo\_picklist (mcp); inputs: reactions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 36: export\_opentrons\_protocol (mcp); inputs: protocolName, reactions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 37: export\_plate\_layout (mcp); inputs: reactions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 38: expression\_cassette\_check (mcp); inputs: circular, host, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 39: expression\_heatmap\_cluster (mcp); inputs: clusterCols, clusterRows, distanceMetric, genes, linkage, samples, values, zScoreRows; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 40: fasta\_filter (mcp); inputs: dropDuplicateSequences, input, maxLength, minLength, nameContains, nameExcludes; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 41: fastq\_qc\_report (mcp); inputs: input, qualityOffset; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 42: fastq\_trim (mcp); inputs: input, minLength, qualityOffset, qualityThreshold; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 43: find\_orfs (mcp); inputs: limit, minAaLength, requireStop, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 44: format\_sequence (mcp); inputs: caseMode, convert, reverse, sequence, stripNonLetters, width; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 45: functional\_enrichment (mcp); inputs: background, collections, genes, maxTermSize, minTermSize; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 46: gc\_content (mcp); inputs: sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 47: gel\_band\_size (mcp); inputs: bandDistances, ladder, ladderDistances; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 48: gene\_dossier (mcp); inputs: gene; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 49: gene\_expression (mcp); inputs: gene; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 50: gene\_model (mcp); inputs: gene; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 51: genome\_region (mcp); inputs: assembly, downstream, format, gene, upstream; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 52: golden\_gate\_design (mcp); inputs: count, dataset, fixed, forbidden, junctions, minCorrectSignal; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 53: golden\_gate\_fidelity (mcp); inputs: compareToNamedSet, dataset, overhangs, riskThreshold; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 54: golden\_gate\_from\_parts (mcp); inputs: enzyme, parts; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 55: golden\_gate\_library (mcp); inputs: enzyme, positions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 56: hgvs\_convert (mcp); inputs: variant; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 57: id\_map\_poll (mcp); inputs: jobId; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 58: id\_map\_submit (mcp); inputs: from, ids, taxId, to; inputs omitted: 0; annotations: {"readOnlyHint":false,"destructiveHint":false,"idempotentHint":false,"openWorldHint":true}
- Tool 59: identity\_matrix (mcp); inputs: caseSensitive, sequences; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 60: in\_silico\_pcr (mcp); inputs: circular, forwardPrimer, maxMismatches, maxProductLength, reversePrimer, template; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 61: kasp\_primer\_design (mcp); inputs: addSecondaryMismatch, alleleA, alleleB, maxAmplicon, minAmplicon, snpPosition, target, targetCoreTm; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 62: ligation\_setup (mcp); inputs: insertLengthBp, insertNgPerUl, inserts, molarRatio, reactionVolumeUl, vectorLengthBp, vectorNg, vectorNgPerUl; inputs omitted: 1; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 63: map\_update\_from\_consensus (mcp); inputs: circular, consensus, design, keepArtifacts, positions; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 64: melting\_temperature (mcp); inputs: dntpMM, mgMM, naMM, oligoNM, sequence, targetTm, tmTolerance; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 65: motif\_discover (mcp); inputs: bothStrands, seed, sequences, width; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 66: motif\_finder (mcp); inputs: limit, maxMismatches, motif, searchReverseStrand, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 67: multiple\_sequence\_alignment (mcp); inputs: input; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 68: multiplex\_panel\_design (mcp); inputs: agarosePercent, ampliconMax, ampliconMin, candidatesPerTarget, dimerThresholdDG, internalDimerThresholdDG, maxTmSpread, targets; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 69: nonrepetitive\_parts\_design (mcp); inputs: background, bothStrands, constraint, count, exclude, gcMax, gcMin, lmax; inputs omitted: 1; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 70: nonrepetitive\_parts\_find (mcp); inputs: bothStrands, lmax, parts, strategy; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 71: od600\_cells (mcp); inputs: dilutionFactor, factorPerOd, od600, organism, pathLengthCm, targetOd, targetVolumeMl, volumeMl; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 72: oligo\_analysis (mcp); inputs: dntpMM, mgMM, naMM, oligoNM, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 73: oligo\_cofold (mcp); inputs: a, alphabet, b, partition, temperature; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 74: oligo\_pool\_screen (mcp); inputs: dntpMM, fasta, internalThresholdDG, maxConflicts, mgMM, naMM, oligoNM, oligos; inputs omitted: 1; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 75: operon\_design (mcp); inputs: genes, includeGenbank, name, optimiseFor, promoter, spacer, terminator; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 76: operon\_scan (mcp); inputs: cdsEnd, cdsStart, maxPromoterMismatches, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 77: ortholog\_map (mcp); inputs: sourceSpecies, symbols, targetSpecies, type; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 78: outcome\_deconvolve (mcp); inputs: candidates, readBases, readChannels; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 79: pairwise\_alignment (mcp); inputs: gap, gapOpen, match, mismatch, mode, seqA, seqB; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 80: parse\_genbank (mcp); inputs: text; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 81: parse\_gff3 (mcp); inputs: asGenbank, limit, seqid, sequence, text; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 82: parse\_sanger\_trace (mcp); inputs: fileBase64, fileName, includeTraces; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 83: parse\_snapgene (mcp); inputs: featureLimit, fileBase64, fileName, includeSequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 84: parse\_structure (mcp); inputs: name, text; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 85: parts\_library\_search (mcp); inputs: includeSequence, kinds, limit, maxLength, minLength, query; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 86: phylogenetic\_tree (mcp); inputs: bootstrapReplicates, sequenceType, sequences; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 87: plasmid\_annotate (mcp); inputs: circular, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 88: plasmid\_deep\_annotate (mcp); inputs: circular, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 89: plasmid\_dossier (mcp); inputs: circular, goldenGateEnzymes, minRepeatLength, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 90: plasmid\_full\_report (mcp); inputs: circular, sequence, topN; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 91: plasmid\_identify (mcp); inputs: circular, sequence, topN; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 92: prime\_editing\_design (mcp); inputs: editEnd, editStart, frameStart, insertedSeq, pbsLength, rttHomology, target; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 93: prime\_editing\_efficiency (mcp); inputs: cellType, sequence, topN, use5Folds; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":true}
- Tool 94: prime\_editing\_twin\_design (mcp); inputs: newSequence, overlapLength, pbsLength, replaceEnd, replaceStart, target; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 95: primer\_design (mcp); inputs: ampliconMax, ampliconMin, dntpMM, excludedRegions, gcClamp, gcMax, gcMin, lenMax; inputs omitted: 15; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 96: primer\_site\_accessibility (mcp); inputs: annealingTemp, circular, maxMismatches, primer, template, windowNt; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 97: primer\_specificity (mcp); inputs: background, forwardPrimer, intendedTemplate, maxMismatches, maxProductLength, reversePrimer; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 98: promoter\_library\_design (mcp); inputs: candidatePool, exclude, gcMax, gcMin, librarySize, lmax, seed, targetMax; inputs omitted: 2; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
- Tool 99: promoter\_predict (mcp); inputs: bothStrands, limit, sequence; inputs omitted: 0; annotations: {"readOnlyHint":true,"destructiveHint":false,"idempotentHint":true,"openWorldHint":false}
Tools omitted: 54.

## Effect readings (AI)
No AI reading shown.

## Change history
No changes recorded in the retained history.

## Payment rails
- Protocols observed: none.
- HTTP 402 seen in retained observations: false.

## Not covered
- We don't call tools.
- We don't rate or certify.
- We don't publish prices.
- We cover only what was observed.

## Evidence
- Identity: observed / declared; observation time: 2026-11-13T10:40:11.867Z.
- Tools: declared; observation time: 2026-11-13T10:40:11.867Z.
- Effect readings (AI): AI reading; observation time: 2026-11-13T10:40:11.867Z.
- Change history: observed; observation time: 2026-11-13T10:40:11.867Z; change observation times: none.
- Payment rails: observed; observation time: 2026-11-13T10:40:11.867Z.

```json
{
  "schema": "interfacedelta-service-md/1",
  "target_key": "sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42",
  "origin": "https://seqbench.com",
  "protocols": [
    "mcp"
  ],
  "observed_at": "2026-11-13T10:40:11.867Z",
  "generated_at": "2026-11-13T11:52:46.368Z",
  "record_url": "https://interfacedelta.com/atlas/sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42",
  "record_api": "https://interfacedelta.com/api/v1/record/services/sha256:40de7ad435bb269217fb05e3ee3ea91f25d3f5d26c7736dbbcb4061fb9157c42",
  "source": "InterfaceDelta atlas",
  "license_note": "Use of this record is governed by https://interfacedelta.com/terms.",
  "identity": {
    "origin": "https://seqbench.com",
    "endpoints": [
      "https://seqbench.com/api/mcp"
    ],
    "protocols": [
      "mcp"
    ],
    "registry_names": [
      "com.seqbench/workbench"
    ],
    "first_retained_observation": "2026-11-13T10:40:11.867Z",
    "latest_observation": "2026-11-13T10:40:11.867Z"
  },
  "tools": [
    {
      "name": "alphafold_lookup",
      "protocol": "mcp",
      "inputs": [
        "accession"
      ],
      "inputs_omitted": 0,
      "annotations": {
        "readOnlyHint": true,
        "destructiveHint": false,
        "idempotentHint": true,
        "openWorldHint": true
      },
      "effects": null
    },
    {
      "name": "annealing_temperature",
      "protocol": "mcp",
      "inputs": [
        "ampliconBp",
        "forwardPrimer",
        "highComplexityTemplate",
        "polymerase",
        "reversePrimer"
      ],
      "inputs_omitted": 0,
      "annotations": {
        "readOnlyHint": true,
        "destructiveHint": false,
        "idempotentHint": true,
        "openWorldHint": false
      },
      "effects": null
    },
    {
      "name": "aso_design",
      "protocol": "mcp",
      "inputs": [
        "length",
        "target",
        "wing"
      ],
      "inputs_omitted": 0,
      "annotations": {
        "readOnlyHint": true,
        "destructiveHint": false,
        "idempotentHint": true,
        "openWorldHint": false
      },
      "effects": null
    },
    {
      "name": "assembly_outcomes",
      "protocol": "mcp",
      "inputs": [
        "circular",
        "dataset",
        "enzyme",
        "fragments",
        "maxAlternatives",
        "method",
        "names",
        "overlapLen"
      ],
      "inputs_omitted": 0,
      "annotations": {
        "readOnlyHint": true,
        "destructiveHint": false,
        "idempotentHint": true,
        "openWorldHint": false
      },
      "effects": null
    },
    {
      "name": "band_traceback",
      "protocol": "mcp",
      "inputs": [
        "circular",
        "forwardPrimer",
        "maxCandidates",
        "maxMismatches",
        "observedSize",
        "reversePrimer",
        "template",
        "toleranceBp"
      ],
      "inputs_omitted": 1,
      "annotations": {
        "readOnlyHint": true,
        "destructiveHint": false,
        "idempotentHint": true,
        "openWorldHint": false
      },
      "effects": null
    },
    {
      "name": "barcode_audit",
      "protocol": "mcp",
      "inputs": [
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    "We don't rate or certify.",
    "We don't publish prices.",
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    {
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      "classes": [
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      ],
      "observed_at": "2026-11-13T10:40:11.867Z"
    }
  ]
}
```